Sample data

Revision as of 11:57, 21 February 2011 by Ggomez (Talk | contribs)

You can get sample files to test PileLine GUI in our Sample data. The following table shows which files are required for which functionality:

Functionality

Files

Description

Somatic mutation calling

(2-smc and n-smc)

For 2-smc you need at least Control1 and Case1 files. For n-smc, you need all.

NOTE: This files have only information for the chromosome 10

Filter and annotation

You need at least the genome file. In order to add tracks, you need GP files.

Genome Browser

hg18.zip (929MB)

You need at least the genome file. In order to add tracks, you need GP files.